HL_9BH5_094

3D structure

PDB id

9BH5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution C. elegans 80S ribosome structure - class 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.63 Å

Loop

Sequence

GAUUGAAAGCUC

Length

12 nucleotides

Bulged bases

9BH5|1|B2|A|1202, 9BH5|1|B2|G|1204

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BH5|1|B2|G|1196
9BH5|1|B2|A|1197
9BH5|1|B2|U|1198
9BH5|1|B2|U|1199
9BH5|1|B2|G|1200
9BH5|1|B2|A|1201
9BH5|1|B2|A|1202
9BH5|1|B2|A|1203
9BH5|1|B2|G|1204
9BH5|1|B2|C|1205
9BH5|1|B2|U|1206
9BH5|1|B2|C|1207

Current chains

Chain B2

18S rRNA

Nearby chains

Chain AP

Small ribosomal subunit protein uS19

Chain Ad

Small ribosomal subunit protein uS14

Chain Af

Ubiquitin-like protein 1-ribosomal protein eS31 fusion protein