HL_9BSS_021

3D structure

PDB id

9BSS (explore in PDB, NAKB, or RNA 3D Hub)

Description

45SRbgA particle in complex with RbgA and YphC. Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGAAUAG

Length

7 nucleotides

Bulged bases

9BSS|1|A|U|691

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9BSS_021 not in the Motif Atlas

Geometric match to HL_4YAZ_004

Geometric discrepancy: 0.3313

The information below is about HL_4YAZ_004

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.5

Basepair signature

cWW-F

Number of instances in this motif group

42

Unit IDs

9BSS|1|A|U|687
9BSS|1|A|G|688
9BSS|1|A|A|689
9BSS|1|A|A|690
9BSS|1|A|U|691
9BSS|1|A|A|692
9BSS|1|A|G|693

Current chains

Chain A

23S rRNA

Nearby chains