HL_9C3H_002
3D structure
- PDB id
- 9C3H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2 Å
Loop
- Sequence
- CACUUG
- Length
- 6 nucleotides
- Bulged bases
- 9C3H|1|L1|U|111
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9C3H_002 not in the Motif Atlas
- Homologous match to HL_8P9A_188
- Geometric discrepancy: 0.1469
- The information below is about HL_8P9A_188
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_13184.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
9C3H|1|L1|C|107
9C3H|1|L1|A|108
9C3H|1|L1|C|109
9C3H|1|L1|U|110
9C3H|1|L1|U|111
9C3H|1|L1|G|112
Current chains
- Chain L1
- 5.8S rRNA
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain LP
- Large ribosomal subunit protein eL37
- Chain LU
- Large ribosomal subunit protein eL39
- Chain Ln
- Large ribosomal subunit protein uL23
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