HL_9C3H_052
3D structure
- PDB id
- 9C3H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2 Å
Loop
- Sequence
- CUG(OMG)GGCGG
- Length
- 9 nucleotides
- Bulged bases
- 9C3H|1|L5|G|4195
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9C3H_052 not in the Motif Atlas
- Homologous match to HL_8P9A_165
- Geometric discrepancy: 0.0995
- The information below is about HL_8P9A_165
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_11974.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 17
Unit IDs
9C3H|1|L5|C|4193
9C3H|1|L5|U|4194
9C3H|1|L5|G|4195
9C3H|1|L5|OMG|4196
9C3H|1|L5|G|4197
9C3H|1|L5|G|4198
9C3H|1|L5|C|4199
9C3H|1|L5|G|4200
9C3H|1|L5|G|4201
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain Lb
- Large ribosomal subunit protein eL29
- Chain Lz
- Large ribosomal subunit protein uL16
- Chain S4
- Transfer RNA; tRNA
- Chain SB
- CCR4-NOT transcription complex subunit 3
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