3D structure

PDB id
9C3H (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.
Experimental method
ELECTRON MICROSCOPY
Resolution
2 Å

Loop

Sequence
GACUCUUUCGAGGC
Length
14 nucleotides
Bulged bases
9C3H|1|S2|A|536, 9C3H|1|S2|U|541, 9C3H|1|S2|G|547
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9C3H|1|S2|G|535
9C3H|1|S2|A|536
9C3H|1|S2|C|537
9C3H|1|S2|U|538
9C3H|1|S2|C|539
9C3H|1|S2|U|540
9C3H|1|S2|U|541
9C3H|1|S2|U|542
9C3H|1|S2|C|543
9C3H|1|S2|G|544
9C3H|1|S2|A|545
9C3H|1|S2|G|546
9C3H|1|S2|G|547
9C3H|1|S2|C|548

Current chains

Chain S2
18S rRNA

Nearby chains

Chain Se
FAU ubiquitin-like and ribosomal protein S30

Coloring options:

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