HL_9C3H_101

3D structure

PDB id

9C3H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2 Å

Loop

Sequence

CGGCAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9C3H_101 not in the Motif Atlas

Homologous match to HL_8C3A_223

Geometric discrepancy: 0.273

The information below is about HL_8C3A_223

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

302

Unit IDs

9C3H|1|S2|C|1565
9C3H|1|S2|G|1566
9C3H|1|S2|G|1567
9C3H|1|S2|C|1568
9C3H|1|S2|A|1569
9C3H|1|S2|G|1570

Current chains

Chain S2

18S rRNA

Nearby chains

Chain ST

Small ribosomal subunit protein uS13

Chain SU

Small ribosomal subunit protein eS19