HL_9C8K_018
3D structure
- PDB id
- 9C8K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit Hemorrhagic Disease Virus reinitiation stimulating TURBS RNA bound to rabbit ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAUCAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 9C8K|1|1|U|1061
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9C8K_018 not in the Motif Atlas
- Homologous match to HL_8P9A_211
- Geometric discrepancy: 0.2605
- The information below is about HL_8P9A_211
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
9C8K|1|1|G|1054
9C8K|1|1|A|1055
9C8K|1|1|U|1056
9C8K|1|1|C|1057
9C8K|1|1|A|1058
9C8K|1|1|G|1059
9C8K|1|1|A|1060
9C8K|1|1|U|1061
9C8K|1|1|A|1062
9C8K|1|1|C|1063
9C8K|1|1|C|1064
Current chains
- Chain 1
- 18S ribosomal RNA
Nearby chains
- Chain O
- Small ribosomal subunit protein uS11
- Chain a
- 40S ribosomal protein S26
Coloring options: