HL_9CL9_017
3D structure
- PDB id
- 9CL9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT 12C IM fraction, B-b3 with RluB bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.04 Å
Loop
- Sequence
- GGAAACAACC
- Length
- 10 nucleotides
- Bulged bases
- 9CL9|1|CA|A|980, 9CL9|1|CA|A|983, 9CL9|1|CA|A|984, 9CL9|1|CA|C|985
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9CL9_017 not in the Motif Atlas
- Geometric match to HL_4V9F_011
- Geometric discrepancy: 0.2329
- The information below is about HL_4V9F_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.6
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 21
Unit IDs
9CL9|1|CA|G|977
9CL9|1|CA|G|978
9CL9|1|CA|A|979
9CL9|1|CA|A|980
9CL9|1|CA|A|981
9CL9|1|CA|C|982
9CL9|1|CA|A|983
9CL9|1|CA|A|984
9CL9|1|CA|C|985
9CL9|1|CA|C|986
Current chains
- Chain CA
- 23S rRNA
Nearby chains
- Chain Q
- Large ribosomal subunit protein bL20
- Chain R
- Large ribosomal subunit protein bL21
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