HL_9CL9_019

3D structure

PDB id

9CL9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT 12C IM fraction, B-b3 with RluB bound

Experimental method

ELECTRON MICROSCOPY

Resolution

5.04 Å

Loop

Sequence

GCGACGCUUAUGCGUUGUU

Length

19 nucleotides

Bulged bases

9CL9|1|CA|U|1173, 9CL9|1|CA|U|1174, 9CL9|1|CA|A|1175, 9CL9|1|CA|U|1176, 9CL9|1|CA|G|1177

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9CL9|1|CA|G|1166
9CL9|1|CA|C|1167
9CL9|1|CA|G|1168
9CL9|1|CA|A|1169
9CL9|1|CA|C|1170
9CL9|1|CA|G|1171
9CL9|1|CA|C|1172
9CL9|1|CA|U|1173
9CL9|1|CA|U|1174
9CL9|1|CA|A|1175
9CL9|1|CA|U|1176
9CL9|1|CA|G|1177
9CL9|1|CA|C|1178
9CL9|1|CA|G|1179
9CL9|1|CA|U|1180
9CL9|1|CA|U|1181
9CL9|1|CA|G|1182
9CL9|1|CA|U|1183
9CL9|1|CA|U|1184

Current chains

Chain CA

23S rRNA

Nearby chains