HL_9CL9_026
3D structure
- PDB id
- 9CL9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT 12C IM fraction, B-b3 with RluB bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.04 Å
Loop
- Sequence
- CGUGAG
- Length
- 6 nucleotides
- Bulged bases
- 9CL9|1|CA|U|2596, 9CL9|1|CA|G|2597
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9CL9_026 not in the Motif Atlas
- Geometric match to HL_4V9F_003
- Geometric discrepancy: 0.1853
- The information below is about HL_4V9F_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 19
Unit IDs
9CL9|1|CA|C|2594
9CL9|1|CA|G|2595
9CL9|1|CA|U|2596
9CL9|1|CA|G|2597
9CL9|1|CA|A|2598
9CL9|1|CA|G|2599
Current chains
- Chain CA
- 23S rRNA
Nearby chains
- Chain A
- Ribosomal large subunit pseudouridine synthase B
Coloring options: