HL_9CL9_037

3D structure

PDB id

9CL9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT 12C IM fraction, B-b3 with RluB bound

Experimental method

ELECTRON MICROSCOPY

Resolution

5.04 Å

Loop

Sequence

UGCUGUGAGGCA

Length

12 nucleotides

Bulged bases

9CL9|1|CA|U|1224

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9CL9|1|CA|U|1219
9CL9|1|CA|G|1220
9CL9|1|CA|C|1221
9CL9|1|CA|U|1222
9CL9|1|CA|G|1223
9CL9|1|CA|U|1224
9CL9|1|CA|G|1225
9CL9|1|CA|A|1226
9CL9|1|CA|G|1227
9CL9|1|CA|G|1228
9CL9|1|CA|C|1229
9CL9|1|CA|A|1230

Current chains

Chain CA

23S rRNA

Nearby chains

Chain Q

Large ribosomal subunit protein bL20

Chain R

Large ribosomal subunit protein bL21