HL_9CL9_038

3D structure

PDB id

9CL9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT 12C IM fraction, B-b3 with RluB bound

Experimental method

ELECTRON MICROSCOPY

Resolution

5.04 Å

Loop

Sequence

CCAACGUUAAUCGGG

Length

15 nucleotides

Bulged bases

9CL9|1|CA|U|1325, 9CL9|1|CA|U|1329, 9CL9|1|CA|G|1332

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9CL9|1|CA|C|1319
9CL9|1|CA|C|1320
9CL9|1|CA|A|1321
9CL9|1|CA|A|1322
9CL9|1|CA|C|1323
9CL9|1|CA|G|1324
9CL9|1|CA|U|1325
9CL9|1|CA|U|1326
9CL9|1|CA|A|1327
9CL9|1|CA|A|1328
9CL9|1|CA|U|1329
9CL9|1|CA|C|1330
9CL9|1|CA|G|1331
9CL9|1|CA|G|1332
9CL9|1|CA|G|1333

Current chains

Chain CA

23S rRNA

Nearby chains

Chain S

Large ribosomal subunit protein uL22