HL_9CN3_027

3D structure

PDB id

9CN3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 39S mitoribosome in complex with antibiotic Linezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.62 Å

Loop

Sequence

UUGGGGCGA

Length

9 nucleotides

Bulged bases

9CN3|1|A|G|2814

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9CN3_027 not in the Motif Atlas

Homologous match to HL_7A0S_052

Geometric discrepancy: 0.0902

The information below is about HL_7A0S_052

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11974.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

17

Unit IDs

9CN3|1|A|U|2812
9CN3|1|A|U|2813
9CN3|1|A|G|2814
9CN3|1|A|G|2815
9CN3|1|A|G|2816
9CN3|1|A|G|2817
9CN3|1|A|C|2818
9CN3|1|A|G|2819
9CN3|1|A|A|2820

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

39S ribosomal protein L16, mitochondrial

Chain W

39S ribosomal protein L27, mitochondrial