HL_9CPA_019
3D structure
- PDB id
- 9CPA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a Mammalian DHX29-bound 43S Pre-initiation Complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6 Å
Loop
- Sequence
- CUUAGCUG
- Length
- 8 nucleotides
- Bulged bases
- 9CPA|1|2|C|710
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9CPA_019 not in the Motif Atlas
- Geometric match to HL_8CRE_219
- Geometric discrepancy: 0.1039
- The information below is about HL_8CRE_219
- Detailed Annotation
- T-loop related
- Broad Annotation
- T-loop
- Motif group
- HL_63894.1
- Basepair signature
- cWW-cWW-F-F-F
- Number of instances in this motif group
- 18
Unit IDs
9CPA|1|2|C|705
9CPA|1|2|U|706
9CPA|1|2|U|707
9CPA|1|2|A|708
9CPA|1|2|G|709
9CPA|1|2|C|710
9CPA|1|2|U|711
9CPA|1|2|G|712
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain p
- eukaryotic translation initiation factor 3 subunit b
- Chain y
- Eukaryotic translation initiation factor 3 subunit A
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