HL_9CPA_023

3D structure

PDB id

9CPA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a Mammalian DHX29-bound 43S Pre-initiation Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

6 Å

Loop

Sequence

UAUUUUGUUGGUUUUCG

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9CPA|1|2|U|881
9CPA|1|2|A|882
9CPA|1|2|U|883
9CPA|1|2|U|884
9CPA|1|2|U|885
9CPA|1|2|U|886
9CPA|1|2|G|887
9CPA|1|2|U|888
9CPA|1|2|U|889
9CPA|1|2|G|890
9CPA|1|2|G|891
9CPA|1|2|U|892
9CPA|1|2|U|893
9CPA|1|2|U|894
9CPA|1|2|U|895
9CPA|1|2|C|896
9CPA|1|2|G|897

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain N

Ribosomal protein S11