HL_9CXF_004

3D structure

PDB id

9CXF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Rail RNA motif

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

GGUAAUUC

Length

8 nucleotides

Bulged bases

9CXF|1|A|A|141, 9CXF|1|A|U|143

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9CXF|1|A|G|138
9CXF|1|A|G|139
9CXF|1|A|U|140
9CXF|1|A|A|141
9CXF|1|A|A|142
9CXF|1|A|U|143
9CXF|1|A|U|144
9CXF|1|A|C|145

Current chains

Chain A

RNA (200-MER)

Nearby chains