HL_9D89_019
3D structure
- PDB id
- 9D89 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 50S ribosomal subunit in complex with PrAMP rumicidin-2 (focused refinement)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.95 Å
Loop
- Sequence
- UUAACUG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9D89_019 not in the Motif Atlas
- Homologous match to HL_5J7L_153
- Geometric discrepancy: 0.1767
- The information below is about HL_5J7L_153
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_13529.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
9D89|1|D|U|643
9D89|1|D|U|644
9D89|1|D|A|645
9D89|1|D|A|646
9D89|1|D|C|647
9D89|1|D|U|648
9D89|1|D|G|649
Current chains
- Chain D
- 23S rRNA
Nearby chains
- Chain 0
- 50S ribosomal protein L33
- Chain B
- 50S ribosomal protein L35
Coloring options: