HL_9DFE_091

3D structure

PDB id

9DFE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with lasso peptide lariocidin and protein Y at 2.60A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

CCCCGCGAGGGG

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9DFE|1|1a|C|1027
9DFE|1|1a|C|1028
9DFE|1|1a|C|1029
9DFE|1|1a|C|1030
9DFE|1|1a|G|1030|||A
9DFE|1|1a|C|1030|||B
9DFE|1|1a|G|1030|||C
9DFE|1|1a|A|1030|||D
9DFE|1|1a|G|1031
9DFE|1|1a|G|1032
9DFE|1|1a|G|1033
9DFE|1|1a|G|1034

Current chains

Chain 1a

16S Ribosomal RNA

Nearby chains