HL_9E0N_029

3D structure

PDB id

9E0N (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis unmethylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.24 Å

Loop

Sequence

CGUAAUAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9E0N_029 not in the Motif Atlas

Geometric match to HL_8P9A_140

Geometric discrepancy: 0.2764

The information below is about HL_8P9A_140

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_98423.1

Basepair signature

cWW-F

Number of instances in this motif group

10

Unit IDs

9E0N|1|A|C|1210
9E0N|1|A|G|1211
9E0N|1|A|U|1212
9E0N|1|A|A|1213
9E0N|1|A|A|1214
9E0N|1|A|U|1215
9E0N|1|A|A|1216
9E0N|1|A|G|1217

Current chains

Chain A

23S rRNA

Nearby chains

Chain 7

50S ribosomal protein L36

Chain G

Large ribosomal subunit protein uL6

Chain J

Large ribosomal subunit protein uL11