HL_9E0N_036

3D structure

PDB id

9E0N (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis unmethylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.24 Å

Loop

Sequence

AAAACCACCGUGACCGCACCUUUCGGGGUGUGGCGUUGGUGGGGCU

Length

46 nucleotides

Bulged bases

9E0N|1|A|C|1579, 9E0N|1|A|U|1585, 9E0N|1|A|C|1586

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9E0N|1|A|A|1563
9E0N|1|A|A|1564
9E0N|1|A|A|1565
9E0N|1|A|A|1566
9E0N|1|A|C|1567
9E0N|1|A|C|1568
9E0N|1|A|A|1569
9E0N|1|A|C|1570
9E0N|1|A|C|1571
9E0N|1|A|G|1572
9E0N|1|A|U|1573
9E0N|1|A|G|1574
9E0N|1|A|A|1575
9E0N|1|A|C|1576
9E0N|1|A|C|1577
9E0N|1|A|G|1578
9E0N|1|A|C|1579
9E0N|1|A|A|1580
9E0N|1|A|C|1581
9E0N|1|A|C|1582
9E0N|1|A|U|1583
9E0N|1|A|U|1584
9E0N|1|A|U|1585
9E0N|1|A|C|1586
9E0N|1|A|G|1587
9E0N|1|A|G|1588
9E0N|1|A|G|1589
9E0N|1|A|G|1590
9E0N|1|A|U|1591
9E0N|1|A|G|1592
9E0N|1|A|U|1593
9E0N|1|A|G|1594
9E0N|1|A|G|1595
9E0N|1|A|C|1596
9E0N|1|A|G|1597
9E0N|1|A|U|1598
9E0N|1|A|U|1599
9E0N|1|A|G|1600
9E0N|1|A|G|1601
9E0N|1|A|U|1602
9E0N|1|A|G|1603
9E0N|1|A|G|1604
9E0N|1|A|G|1605
9E0N|1|A|G|1606
9E0N|1|A|C|1607
9E0N|1|A|U|1608

Current chains

Chain A

23S rRNA

Nearby chains

Chain f

Small ribosomal subunit protein bS6