HL_9E0N_069
3D structure
- PDB id
- 9E0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis unmethylated 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.24 Å
Loop
- Sequence
- GGUCCCAUCCCGAAC
- Length
- 15 nucleotides
- Bulged bases
- 9E0N|1|B|U|41
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9E0N_069 not in the Motif Atlas
- Geometric match to HL_4V9F_074
- Geometric discrepancy: 0.2484
- The information below is about HL_4V9F_074
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97756.3
- Basepair signature
- cWW-cSH-cWS-F-tSW-cSW-F-cWW-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
9E0N|1|B|G|34
9E0N|1|B|G|35
9E0N|1|B|U|36
9E0N|1|B|C|37
9E0N|1|B|C|38
9E0N|1|B|C|39
9E0N|1|B|A|40
9E0N|1|B|U|41
9E0N|1|B|C|42
9E0N|1|B|C|43
9E0N|1|B|C|44
9E0N|1|B|G|45
9E0N|1|B|A|46
9E0N|1|B|A|47
9E0N|1|B|C|48
Current chains
- Chain B
- 5S rRNA
Nearby chains
- Chain 2
- Large ribosomal subunit protein bL31
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain F
- Large ribosomal subunit protein uL5
- Chain P
- Large ribosomal subunit protein uL18
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