HL_9E0N_091

3D structure

PDB id

9E0N (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis unmethylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.24 Å

Loop

Sequence

AGAGAU

Length

6 nucleotides

Bulged bases

9E0N|1|a|A|997

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9E0N_091 not in the Motif Atlas

Geometric match to HL_3OXE_002

Geometric discrepancy: 0.2786

The information below is about HL_3OXE_002

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_37569.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

9

Unit IDs

9E0N|1|a|A|995
9E0N|1|a|G|996
9E0N|1|a|A|997
9E0N|1|a|G|998
9E0N|1|a|A|999
9E0N|1|a|U|1000

Current chains

Chain a

16S rRNA

Nearby chains

Chain n

Small ribosomal subunit protein uS14B

Chain s

Small ribosomal subunit protein uS19