3D structure

PDB id
9E0N (explore in PDB, NAKB, or RNA 3D Hub)
Description
M. smegmatis unmethylated 70S ribosome structure
Experimental method
ELECTRON MICROSCOPY
Resolution
3.24 Å

Loop

Sequence
CGAUGCCGUGAGGUGGAG
Length
18 nucleotides
Bulged bases
9E0N|1|a|U|1248
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9E0N|1|a|C|1240
9E0N|1|a|G|1241
9E0N|1|a|A|1242
9E0N|1|a|U|1243
9E0N|1|a|G|1244
9E0N|1|a|C|1245
9E0N|1|a|C|1246
9E0N|1|a|G|1247
9E0N|1|a|U|1248
9E0N|1|a|G|1249
9E0N|1|a|A|1250
9E0N|1|a|G|1251
9E0N|1|a|G|1252
9E0N|1|a|U|1253
9E0N|1|a|G|1254
9E0N|1|a|G|1255
9E0N|1|a|A|1256
9E0N|1|a|G|1257

Current chains

Chain a
16S rRNA

Nearby chains

Chain j
Small ribosomal subunit protein uS10
Chain m
Small ribosomal subunit protein uS13
Chain s
Small ribosomal subunit protein uS19

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