HL_9E0P_009

3D structure

PDB id

9E0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis methylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.17 Å

Loop

Sequence

UGUGAUACCGGGUAGGGGUUG

Length

21 nucleotides

Bulged bases

9E0P|1|A|U|285, 9E0P|1|A|U|288, 9E0P|1|A|C|291, 9E0P|1|A|U|301, 9E0P|1|A|U|302

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9E0P|1|A|U|283
9E0P|1|A|G|284
9E0P|1|A|U|285
9E0P|1|A|G|286
9E0P|1|A|A|287
9E0P|1|A|U|288
9E0P|1|A|A|289
9E0P|1|A|C|290
9E0P|1|A|C|291
9E0P|1|A|G|292
9E0P|1|A|G|293
9E0P|1|A|G|294
9E0P|1|A|U|295
9E0P|1|A|A|296
9E0P|1|A|G|297
9E0P|1|A|G|298
9E0P|1|A|G|299
9E0P|1|A|G|300
9E0P|1|A|U|301
9E0P|1|A|U|302
9E0P|1|A|G|303

Current chains

Chain A

23S rRNA

Nearby chains

Chain H

50S ribosomal protein L9