HL_9E0P_049
3D structure
- PDB id
- 9E0P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis methylated 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- GUAAAGAUGC
- Length
- 10 nucleotides
- Bulged bases
- 9E0P|1|A|A|2254, 9E0P|1|A|A|2255, 9E0P|1|A|G|2256
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9E0P_049 not in the Motif Atlas
- Geometric match to HL_4WF9_047
- Geometric discrepancy: 0.1335
- The information below is about HL_4WF9_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_61996.3
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
9E0P|1|A|G|2251
9E0P|1|A|U|2252
9E0P|1|A|A|2253
9E0P|1|A|A|2254
9E0P|1|A|A|2255
9E0P|1|A|G|2256
9E0P|1|A|A|2257
9E0P|1|A|U|2258
9E0P|1|A|G|2259
9E0P|1|A|C|2260
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 3
- Large ribosomal subunit protein bL32
- Chain 8
- 50S ribosomal protein bL37
- Chain D
- Large ribosomal subunit protein uL3
- Chain R
- Large ribosomal subunit protein bL20
- Chain S
- Large ribosomal subunit protein bL21
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