HL_9E0P_070
3D structure
- PDB id
- 9E0P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis methylated 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- CCCUUCCG
- Length
- 8 nucleotides
- Bulged bases
- 9E0P|1|B|U|87
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9E0P_070 not in the Motif Atlas
- Geometric match to HL_8CRE_014
- Geometric discrepancy: 0.3828
- The information below is about HL_8CRE_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_41464.2
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
9E0P|1|B|C|83
9E0P|1|B|C|84
9E0P|1|B|C|85
9E0P|1|B|U|86
9E0P|1|B|U|87
9E0P|1|B|C|88
9E0P|1|B|C|89
9E0P|1|B|G|90
Current chains
- Chain B
- 5S rRNA
Nearby chains
- Chain 1
- Large ribosomal subunit protein uL30
- Chain 8
- 50S ribosomal protein bL37
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain W
- Large ribosomal subunit protein bL25
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