HL_9E0P_071
3D structure
- PDB id
- 9E0P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis methylated 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- UUUGAUCCUGG
- Length
- 11 nucleotides
- Bulged bases
- 9E0P|1|a|U|18
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9E0P_071 not in the Motif Atlas
- Geometric match to HL_5J7L_001
- Geometric discrepancy: 0.2447
- The information below is about HL_5J7L_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89881.5
- Basepair signature
- cWW-tHW-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
9E0P|1|a|U|16
9E0P|1|a|U|17
9E0P|1|a|U|18
9E0P|1|a|G|19
9E0P|1|a|A|20
9E0P|1|a|U|21
9E0P|1|a|C|22
9E0P|1|a|C|23
9E0P|1|a|U|24
9E0P|1|a|G|25
9E0P|1|a|G|26
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain e
- Small ribosomal subunit protein uS5
- Chain l
- Small ribosomal subunit protein uS12
Coloring options: