HL_9E0P_085
3D structure
- PDB id
- 9E0P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis methylated 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- CGGUGGAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9E0P_085 not in the Motif Atlas
- Geometric match to HL_8CRE_210
- Geometric discrepancy: 0.2617
- The information below is about HL_8CRE_210
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.3
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
9E0P|1|a|C|669
9E0P|1|a|G|670
9E0P|1|a|G|671
9E0P|1|a|U|672
9E0P|1|a|G|673
9E0P|1|a|G|674
9E0P|1|a|A|675
9E0P|1|a|A|676
9E0P|1|a|U|677
9E0P|1|a|G|678
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain g
- Small ribosomal subunit protein uS7
- Chain k
- Small ribosomal subunit protein uS11
Coloring options: