HL_9E0P_090
3D structure
- PDB id
- 9E0P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis methylated 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- GAUGCAACGC
- Length
- 10 nucleotides
- Bulged bases
- 9E0P|1|a|U|947, 9E0P|1|a|G|953
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9E0P_090 not in the Motif Atlas
- Geometric match to HL_8CRE_216
- Geometric discrepancy: 0.3715
- The information below is about HL_8CRE_216
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
9E0P|1|a|G|945
9E0P|1|a|A|946
9E0P|1|a|U|947
9E0P|1|a|G|948
9E0P|1|a|C|949
9E0P|1|a|A|950
9E0P|1|a|A|951
9E0P|1|a|C|952
9E0P|1|a|G|953
9E0P|1|a|C|954
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain i
- Small ribosomal subunit protein uS9
- Chain j
- Small ribosomal subunit protein uS10
- Chain n
- Small ribosomal subunit protein uS14B
Coloring options: