HL_9E0P_099

3D structure

PDB id

9E0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis methylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.17 Å

Loop

Sequence

GAUCAGCAACGC

Length

12 nucleotides

Bulged bases

9E0P|1|a|C|1344, 9E0P|1|a|A|1345, 9E0P|1|a|C|1347

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9E0P|1|a|G|1338
9E0P|1|a|A|1339
9E0P|1|a|U|1340
9E0P|1|a|C|1341
9E0P|1|a|A|1342
9E0P|1|a|G|1343
9E0P|1|a|C|1344
9E0P|1|a|A|1345
9E0P|1|a|A|1346
9E0P|1|a|C|1347
9E0P|1|a|G|1348
9E0P|1|a|C|1349

Current chains

Chain a

16S rRNA

Nearby chains

Chain c

Small ribosomal subunit protein uS3

Chain i

Small ribosomal subunit protein uS9

Chain j

Small ribosomal subunit protein uS10

Chain m

Small ribosomal subunit protein uS13

Chain n

Small ribosomal subunit protein uS14B