HL_9E16_009
3D structure
- PDB id
- 9E16 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying an E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GAAACAUC
- Length
- 8 nucleotides
- Bulged bases
- 9E16|1|I|A|198, 9E16|1|I|A|201
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9E16_009 not in the Motif Atlas
- Homologous match to HL_8B0X_038
- Geometric discrepancy: 0.1354
- The information below is about HL_8B0X_038
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02262.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 36
Unit IDs
9E16|1|I|G|196
9E16|1|I|A|197
9E16|1|I|A|198
9E16|1|I|A|199
9E16|1|I|C|200
9E16|1|I|A|201
9E16|1|I|U|202
9E16|1|I|C|203
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain L
- 50S ribosomal protein L15
- Chain n
- Transfer RNA; tRNA
- Chain y
- 50S ribosomal protein L28 C-
Coloring options: