HL_9E16_049

3D structure

PDB id

9E16 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying an E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CCUUGCG

Length

7 nucleotides

Bulged bases

9E16|1|I|U|1963, 9E16|1|I|C|1966

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9E16_049 not in the Motif Atlas

Geometric match to HL_7ENI_002

Geometric discrepancy: 0.3182

The information below is about HL_7ENI_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_21043.1

Basepair signature

cWW-cSW-F

Number of instances in this motif group

9

Unit IDs

9E16|1|I|C|1961
9E16|1|I|C|1962
9E16|1|I|U|1963
9E16|1|I|U|1964
9E16|1|I|G|1965
9E16|1|I|C|1966
9E16|1|I|G|1967

Current chains

Chain I

23S ribosomal RNA

Nearby chains