HL_9E16_081
3D structure
- PDB id
- 9E16 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying an E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GGUGACGGC
- Length
- 9 nucleotides
- Bulged bases
- 9E16|1|a|G|265
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9E16_081 not in the Motif Atlas
- Homologous match to HL_8B0X_005
- Geometric discrepancy: 0.1522
- The information below is about HL_8B0X_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87268.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
9E16|1|a|G|258
9E16|1|a|G|259
9E16|1|a|U|260
9E16|1|a|G|261
9E16|1|a|A|262
9E16|1|a|C|263
9E16|1|a|G|264
9E16|1|a|G|265
9E16|1|a|C|266
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain q
- 30S ribosomal protein S17
- Chain t
- 30S ribosomal protein S20
Coloring options: