3D structure

PDB id
9E16 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying an E-tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
2.7 Å

Loop

Sequence
GAUCAGCAACGC
Length
12 nucleotides
Bulged bases
9E16|1|a|A|1356, 9E16|1|a|C|1357
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9E16|1|a|G|1348
9E16|1|a|A|1349
9E16|1|a|U|1350
9E16|1|a|C|1351
9E16|1|a|A|1352
9E16|1|a|G|1353
9E16|1|a|C|1354
9E16|1|a|A|1355
9E16|1|a|A|1356
9E16|1|a|C|1357
9E16|1|a|G|1358
9E16|1|a|C|1359

Current chains

Chain a
16S ribosomal RNA

Nearby chains

Chain 9
30S ribosomal protein S14 C-
Chain i
30S ribosomal protein S9
Chain j
30S ribosomal protein S10

Coloring options:

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