HL_9E1S_002
3D structure
- PDB id
- 9E1S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.39 Å
Loop
- Sequence
- CAUUCCG
- Length
- 7 nucleotides
- Bulged bases
- 9E1S|1|B|U|40
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9E1S_002 not in the Motif Atlas
- Homologous match to HL_9H3G_074
- Geometric discrepancy: 0.1535
- The information below is about HL_9H3G_074
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_59381.4
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
9E1S|1|B|C|37
9E1S|1|B|A|38
9E1S|1|B|U|39
9E1S|1|B|U|40
9E1S|1|B|C|41
9E1S|1|B|C|42
9E1S|1|B|G|43
Current chains
- Chain B
- 5S ribosomal RNA
Nearby chains
- Chain F
- 50S ribosomal protein L5
- Chain I
- Large subunit ribosomal RNA; LSU rRNA
- Chain O
- 50S ribosomal protein L18
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