HL_9E6Q_032

3D structure

PDB id

9E6Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Pyrobaculum calidifontis 50S ribosomal subunit in complex with Dri

Experimental method

ELECTRON MICROSCOPY

Resolution

1.95 Å

Loop

Sequence

UUCAAUA

Length

7 nucleotides

Bulged bases

9E6Q|1|1|U|1454, 9E6Q|1|1|U|1458

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_49081.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

17

Unit IDs

9E6Q|1|1|U|1453
9E6Q|1|1|U|1454
9E6Q|1|1|C|1455
9E6Q|1|1|A|1456
9E6Q|1|1|A|1457
9E6Q|1|1|U|1458
9E6Q|1|1|A|1459

Current chains

Chain 1

23S rRNA

Nearby chains

Chain AQ

Large ribosomal subunit protein eL19

Chain AT

Large ribosomal subunit protein uL22

Chain Af

Large ribosomal subunit protein eL39