HL_9E6Q_055
3D structure
- PDB id
- 9E6Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Pyrobaculum calidifontis 50S ribosomal subunit in complex with Dri
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.95 Å
Loop
- Sequence
- UUGAACGCAAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9E6Q_055 not in the Motif Atlas
- Homologous match to HL_4V9F_059
- Geometric discrepancy: 0.2901
- The information below is about HL_4V9F_059
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91939.2
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
9E6Q|1|1|U|2467
9E6Q|1|1|U|2468
9E6Q|1|1|G|2469
9E6Q|1|1|A|2470
9E6Q|1|1|A|2471
9E6Q|1|1|C|2472
9E6Q|1|1|G|2473
9E6Q|1|1|C|2474
9E6Q|1|1|A|2475
9E6Q|1|1|A|2476
9E6Q|1|1|G|2477
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain AL
- Large ribosomal subunit protein uL15
- Chain AS
- Large ribosomal subunit protein eL21
- Chain Ah
- eL42
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