HL_9EBB_003
3D structure
- PDB id
- 9EBB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CCUCCG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9EBB_003 not in the Motif Atlas
- Geometric match to HL_4QLM_001
- Geometric discrepancy: 0.1958
- The information below is about HL_4QLM_001
- Detailed Annotation
- GNRA
- Broad Annotation
- GNRA
- Motif group
- HL_34789.6
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 434
Unit IDs
9EBB|1|B|C|83
9EBB|1|B|C|84
9EBB|1|B|U|85
9EBB|1|B|C|86
9EBB|1|B|C|87
9EBB|1|B|G|88
Current chains
- Chain B
- 5S ribosomal RNA
Nearby chains
- Chain 7
- 50S ribosomal protein bL37
- Chain I
- Large subunit ribosomal RNA; LSU rRNA
- Chain V
- 50S ribosomal protein L25
- Chain Z
- 50S ribosomal protein L30
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