HL_9EBB_041

3D structure

PDB id

9EBB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

9EBB|1|I|U|1602

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9EBB_041 not in the Motif Atlas

Geometric match to HL_6DME_002

Geometric discrepancy: 0.3071

The information below is about HL_6DME_002

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_13571.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

3

Unit IDs

9EBB|1|I|C|1600
9EBB|1|I|U|1601
9EBB|1|I|U|1602
9EBB|1|I|C|1603
9EBB|1|I|G|1604
9EBB|1|I|G|1605

Current chains

Chain I

23S ribosomal RNA

Nearby chains