Motif HL_13571.1 Version HL_13571.1 of this group appears in releases 4.10 to 4.10
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_6DLR_001 | 6DLR | 0.8840 | 1 | UNCG variation | A | Guanidine-I riboswitch | C | 27 | U | 28 | C | 30 | G | 31 | G | 32 | cWW | tSW |
| 2 | HL_5ML7_002 | 5ML7 | 0.0000 | 1 | UNCG | B | 23S ribosomal RNA | C | 2187 | G | 2188 | U | 2190 | A | 2191 | G | 2192 | cWW | |
| 3 | HL_6DME_002 | 6DME | 0.2858 | 1 | UNCG variation | A | ppGpp Riboswitch | C | 57 | U | 58 | C | 60 | G | 61 | G | 62 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUUCGG | 2 |
| CGCUAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUCG | 2 |
| GCUA | 1 |
Release history
| Release | 4.10 |
|---|---|
| Date | 2026-05-20 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- UNCG variation (2)
- UNCG (1)
- Basepair signature
- cWW-F-F-F
- Heat map statistics
- Min 0.29 | Avg 0.48 | Max 0.99
Coloring options: