HL_9EBB_099

3D structure

PDB id

9EBB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

9EBB|1|a|G|1085

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9EBB_099 not in the Motif Atlas

Homologous match to HL_8B0X_022

Geometric discrepancy: 0.0814

The information below is about HL_8B0X_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_63894.4

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

22

Unit IDs

9EBB|1|a|G|1080
9EBB|1|a|U|1081
9EBB|1|a|U|1082
9EBB|1|a|A|1083
9EBB|1|a|A|1084
9EBB|1|a|G|1085
9EBB|1|a|U|1086
9EBB|1|a|C|1087

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain g

30S ribosomal protein S7