HL_9ED0_010

3D structure

PDB id

9ED0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human LARP1 bound to the 40S small ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GACUCUUUCGAGGC

Length

14 nucleotides

Bulged bases

9ED0|1|2|C|539

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ED0|1|2|G|535
9ED0|1|2|A|536
9ED0|1|2|C|537
9ED0|1|2|U|538
9ED0|1|2|C|539
9ED0|1|2|U|540
9ED0|1|2|U|541
9ED0|1|2|U|542
9ED0|1|2|C|543
9ED0|1|2|G|544
9ED0|1|2|A|545
9ED0|1|2|G|546
9ED0|1|2|G|547
9ED0|1|2|C|548

Current chains

Chain 2

rRNA

Nearby chains

Chain e

Small ribosomal subunit protein eS30