HL_9EHO_047

3D structure

PDB id

9EHO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Octopus ribosome, hybrid 80S

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UUCAGUACG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9EHO|1|5|U|4257
9EHO|1|5|U|4258
9EHO|1|5|C|4259
9EHO|1|5|A|4260
9EHO|1|5|G|4261
9EHO|1|5|U|4262
9EHO|1|5|A|4263
9EHO|1|5|C|4264
9EHO|1|5|G|4265

Current chains

Chain 5

28S rRNA

Nearby chains

Chain Q

Large ribosomal subunit protein uL15/eL18 domain-containing protein

Chain T

60S ribosomal protein L21

Chain a

Large ribosomal subunit protein uL15

Chain o

Large ribosomal subunit protein eL42