HL_9EHO_064

3D structure

PDB id

9EHO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Octopus ribosome, hybrid 80S

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGUGACUC

Length

8 nucleotides

Bulged bases

9EHO|1|AA|U|527

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9EHO|1|AA|G|521
9EHO|1|AA|G|522
9EHO|1|AA|U|523
9EHO|1|AA|G|524
9EHO|1|AA|A|525
9EHO|1|AA|C|526
9EHO|1|AA|U|527
9EHO|1|AA|C|528

Current chains

Chain AA

18S rRNA

Nearby chains

Chain FF

40S ribosomal protein S4

Chain HH

Small ribosomal subunit protein eS6

Chain MM

40S ribosomal protein S11