HL_9F1B_017
3D structure
- PDB id
- 9F1B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.01 Å
Loop
- Sequence
- UAUUUUGUUGGUUUUCG
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9F1B_017 not in the Motif Atlas
- Homologous match to HL_8C3A_210
- Geometric discrepancy: 0.4883
- The information below is about HL_8C3A_210
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_08554.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
9F1B|1|A2|U|886
9F1B|1|A2|A|887
9F1B|1|A2|U|888
9F1B|1|A2|U|889
9F1B|1|A2|U|890
9F1B|1|A2|U|891
9F1B|1|A2|G|892
9F1B|1|A2|U|893
9F1B|1|A2|U|894
9F1B|1|A2|G|895
9F1B|1|A2|G|896
9F1B|1|A2|U|897
9F1B|1|A2|U|898
9F1B|1|A2|U|899
9F1B|1|A2|U|900
9F1B|1|A2|C|901
9F1B|1|A2|G|902
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain Af
- 40S ribosomal protein S6
- Chain Ak
- 40S ribosomal protein S11
Coloring options: