HL_9F1B_096
3D structure
- PDB id
- 9F1B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.01 Å
Loop
- Sequence
- UUCAG(OMU)ACG
- Length
- 9 nucleotides
- Bulged bases
- 9F1B|1|B5|A|4050
- QA status
- Modified nucleotides: OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9F1B_096 not in the Motif Atlas
- Homologous match to HL_8C3A_059
- Geometric discrepancy: 0.1673
- The information below is about HL_8C3A_059
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_34636.1
- Basepair signature
- cWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
9F1B|1|B5|U|4047
9F1B|1|B5|U|4048
9F1B|1|B5|C|4049
9F1B|1|B5|A|4050
9F1B|1|B5|G|4051
9F1B|1|B5|OMU|4052
9F1B|1|B5|A|4053
9F1B|1|B5|C|4054
9F1B|1|B5|G|4055
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BQ
- Large ribosomal subunit protein eL18
- Chain BT
- 60S ribosomal protein L21
- Chain Ba
- 60S ribosomal protein L27a
- Chain Bo
- Large ribosomal subunit protein eL42
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