HL_9F1B_127
3D structure
- PDB id
- 9F1B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.01 Å
Loop
- Sequence
- UCAAACGGUA(6MZ)CG
- Length
- 13 nucleotides
- Bulged bases
- 9F1B|1|B5|A|3960, 9F1B|1|B5|C|3967
- QA status
- Modified nucleotides: 6MZ
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9F1B_127 not in the Motif Atlas
- Homologous match to HL_8P9A_166
- Geometric discrepancy: 0.1118
- The information below is about HL_8P9A_166
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02042.1
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
9F1B|1|B5|U|3956
9F1B|1|B5|C|3957
9F1B|1|B5|A|3958
9F1B|1|B5|A|3959
9F1B|1|B5|A|3960
9F1B|1|B5|C|3961
9F1B|1|B5|G|3962
9F1B|1|B5|G|3963
9F1B|1|B5|U|3964
9F1B|1|B5|A|3965
9F1B|1|B5|6MZ|3966
9F1B|1|B5|C|3967
9F1B|1|B5|G|3968
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BI
- 60S ribosomal protein L10
- Chain BT
- 60S ribosomal protein L21
- Chain Bb
- 60S ribosomal protein L29
Coloring options: