HL_9F1D_062
3D structure
- PDB id
- 9F1D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.26 Å
Loop
- Sequence
- GGAUGAAC
- Length
- 8 nucleotides
- Bulged bases
- 9F1D|1|B5|A|1830, 9F1D|1|B5|A|1831
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9F1D_062 not in the Motif Atlas
- Homologous match to HL_5TBW_026
- Geometric discrepancy: 0.131
- The information below is about HL_5TBW_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_44398.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
9F1D|1|B5|G|1825
9F1D|1|B5|G|1826
9F1D|1|B5|A|1827
9F1D|1|B5|U|1828
9F1D|1|B5|G|1829
9F1D|1|B5|A|1830
9F1D|1|B5|A|1831
9F1D|1|B5|C|1832
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain B7
- 5S ribosomal RNA; 5S rRNA
- Chain BF
- Ribosomal Protein uL30
- Chain Be
- Ribosomal protein L32
- Chain Bf
- 60S ribosomal protein L35a
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