HL_9F1D_104
3D structure
- PDB id
- 9F1D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.26 Å
Loop
- Sequence
- UGAGGA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9F1D_104 not in the Motif Atlas
- Homologous match to HL_8C3A_067
- Geometric discrepancy: 0.1586
- The information below is about HL_8C3A_067
- Detailed Annotation
- Ribsomal LSU H95
- Broad Annotation
- Ribsomal LSU H95
- Motif group
- HL_65794.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
9F1D|1|B5|U|4392
9F1D|1|B5|G|4393
9F1D|1|B5|A|4394
9F1D|1|B5|G|4395
9F1D|1|B5|G|4396
9F1D|1|B5|A|4397
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BR
- Ribosomal protein L19
- Chain BU
- 60S ribosomal protein L22
- Chain Bd
- 60S ribosomal protein L31
- Chain Cu
- Transcription factor BTF3
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