HL_9F1D_129
3D structure
- PDB id
- 9F1D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.26 Å
Loop
- Sequence
- AUCUCGUCUGAUCU
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9F1D_129 not in the Motif Atlas
- Homologous match to HL_8C3A_228
- Geometric discrepancy: 0.15
- The information below is about HL_8C3A_228
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50688.1
- Basepair signature
- cWW-cWS-F-tSW-F-tSH-tSH-cWW-F-F
- Number of instances in this motif group
- 2
Unit IDs
9F1D|1|B7|A|32
9F1D|1|B7|U|33
9F1D|1|B7|C|34
9F1D|1|B7|U|35
9F1D|1|B7|C|36
9F1D|1|B7|G|37
9F1D|1|B7|U|38
9F1D|1|B7|C|39
9F1D|1|B7|U|40
9F1D|1|B7|G|41
9F1D|1|B7|A|42
9F1D|1|B7|U|43
9F1D|1|B7|C|44
9F1D|1|B7|U|45
Current chains
- Chain B7
- 5S rRNA
Nearby chains
- Chain B
- Large ribosomal subunit protein uL18
- Chain B5
- Large subunit ribosomal RNA; LSU rRNA
- Chain BJ
- 60S ribosomal protein L11
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